Transcript: ENST00000368366.1 FAM189B-003

Description

family with sequence similarity 189, member B [Source:HGNC Symbol;Acc:1233]

Gene Synonyms

C1orf2, COTE1, cote1

Location

Chromosome 1: 155,217,008-155,221,599 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 2438 variant alleles and maps to 473 oligo probes.

Gene

This transcript is a product of gene ENSG00000160767.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361361.2	FAM189B-001	3082	668aa	ENSP00000354958.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1103	P81408	NM_006589.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368368.3	FAM189B-004	2609	650aa	ENSP00000357352.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58035	P81408	NM_001267608.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350210.2	FAM189B-002	2379	572aa	ENSP00000307128.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1104	P81408	NM_198264.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491082.1	FAM189B-008	1006	325aa	ENSP00000427011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD59	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487649.1	FAM189B-007	1499	144aa	ENSP00000427520.1	Nonsense mediated decay		Q96AD8	-	-
ENST00000472550.1	FAM189B-010	948	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481822.1	FAM189B-006	2103	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000368366.1	FAM189B-003	1962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497941.1	FAM189B-009	871	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,962 bps,

Version

ENST00000368366.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000087226 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000368366.1 FAM189B-003

Summary