Transcript: ENST00000368485.3 IL6R-001

Description

interleukin 6 receptor [Source:HGNC Symbol;Acc:6019]

Gene Synonyms

CD126, IL-6R-1, IL-6RA, IL6Q, IL6RA, IL6RQ, gp80

Location

Chromosome 1: 154,377,669-154,441,926 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 20 domains and features, is associated with 28225 variant alleles and maps to 725 oligo probes.

Gene

This transcript is a product of gene ENSG00000160712.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368485.3	IL6R-001	5914	468aa	ENSP00000357470.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1067	A0N0L5 P08887	NM_000565.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344086.4	IL6R-003	3217	365aa	ENSP00000340589.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1068	P08887	NM_181359.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476006.1	IL6R-002	881	294aa	ENSP00000423668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000515190.1	IL6R-007	570	190aa	ENSP00000423036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000512471.1	IL6R-004	527	170aa	ENSP00000423184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9R8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507256.1	IL6R-005	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502679.1	IL6R-006	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 5,914 bps, Translation length: 468 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08887

CCDS

This transcript is a member of the Human CCDS set: CCDS1067

Version

ENST00000368485.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000087911 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000368485.3 IL6R-001

Summary