Transcript: ENST00000427746.1 HLCS-004

Description

holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) [Source:HGNC Symbol;Acc:4976]

Gene Synonyms

HCS

Location

Chromosome 21: 38,309,514-38,362,524 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 23190 variant alleles and maps to 178 oligo probes.

Gene

This transcript is a product of gene ENSG00000159267.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399120.1	HLCS-002	6466	726aa	ENSP00000382071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13647	C9JCQ9 C9JD75 P50747	NM_001242784.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336648.4	HLCS-001	6010	726aa	ENSP00000338387.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13647	C9JCQ9 C9JD75 P50747	NM_001242785.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448340.1	HLCS-003	780	92aa	ENSP00000392923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCQ9 C9JD75 P50747	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419461.1	HLCS-005	702	86aa	ENSP00000396370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCQ9 C9JD75	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427746.1	HLCS-004	666	77aa	ENSP00000396443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482273.1	HLCS-006	729	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 666 bps, Translation length: 77 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000427746.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000194689 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000427746.1 HLCS-004

Summary