Transcript: ENST00000374553.2 EDA-001

Description

ectodysplasin A [Source:HGNC Symbol;Acc:3157]

Gene Synonyms

ECTD1, ED1, ED1-A1, ED1-A2, EDA-A1, EDA-A2, EDA1, EDA2, HED, HED1, ODT1, STHAGX1, XHED, XLHED

Location

Chromosome X: 68,835,911-69,259,319 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 128394 variant alleles and maps to 515 oligo probes.

Gene

This transcript is a product of gene ENSG00000158813.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374552.4	EDA-002	5278	391aa	ENSP00000363680.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14394	D6RA95 Q92838	NM_001399.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374553.2	EDA-001	5272	389aa	ENSP00000363681.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43966	D6RA95 Q92838	NM_001005612.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524573.1	EDA-008	1381	386aa	ENSP00000432585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35319	Q92838	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527388.1	EDA-009	927	148aa	ENSP00000434861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55436	Q92838	NM_001005613.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525810.1	EDA-007	843	135aa	ENSP00000434195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35318	Q92838	NM_001005610.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338901.3	EDA-201	689	148aa	ENSP00000340611.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55436	Q92838	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503592.1	EDA-005	557	136aa	ENSP00000423037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA95	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502251.1	EDA-004	1167	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510681.2	EDA-006	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530321.1	EDA-011	339	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533317.1	EDA-010	1462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000374548.1	EDA-003	1116	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 5,272 bps, Translation length: 389 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92838

CCDS

This transcript is a member of the Human CCDS set: CCDS43966

Version

ENST00000374553.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000057047 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000374553.2 EDA-001

Summary