Transcript: ENST00000449343.2 NCF1-007

Description

neutrophil cytosolic factor 1 [Source:HGNC Symbol;Acc:7660]

Gene Synonyms

NCF1A, NOXO2, SH3PXD1A, p47phox

Location

Chromosome 7: 74,188,358-74,197,883 forward strand.

About this transcript

This transcript has 6 exons, is associated with 2953 variant alleles and maps to 575 oligo probes.

Gene

This transcript is a product of gene ENSG00000158517.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000289473.4	NCF1-001	1396	390aa	ENSP00000289473.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34657	P14598	NM_000265.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433458.1	NCF1-014	584	187aa	ENSP00000392870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J155	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000442021.2	NCF1-011	439	146aa	ENSP00000401935.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1S1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000443956.3	NCF1-003	803	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486097.1	NCF1-004	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000438106.1	NCF1-015	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000398421.2	NCF1-002	2354	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000455062.1	NCF1-009	1518	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000449343.2	NCF1-007	1074	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488197.1	NCF1-012	907	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464878.1	NCF1-013	774	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,074 bps,

Version

ENST00000449343.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000343436 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000449343.2 NCF1-007

Summary