Transcript: ENST00000381134.3 ARSE-001

Description

arylsulfatase E (chondrodysplasia punctata 1) [Source:HGNC Symbol;Acc:719]

Gene Synonyms

ASE, CDPX, CDPX1, CDPXR

Location

About this transcript

This transcript has 11 exons, is annotated with 18 domains and features, is associated with 10724 variant alleles and maps to 496 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000545496.1	ARSE-202	2158	614aa	ENSP00000441417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYY5	NM_001282628.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540563.1	ARSE-201	1899	544aa	ENSP00000438198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H324	NM_001282631.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381134.3	ARSE-001	1853	589aa	ENSP00000370526.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14122	C9J5G7 P51690	NM_000047.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438544.1	ARSE-002	644	178aa	ENSP00000406528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J5G7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000496095.1	ARSE-004	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483425.1	ARSE-003	248	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,853 bps, Translation length: 589 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51690

CCDS

This transcript is a member of the Human CCDS set: CCDS14122

Version

ENST00000381134.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055643 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.