Transcript: ENST00000359655.4 SUPV3L1-001

Description

suppressor of var1, 3-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:11471]

Gene Synonyms

SUV3

Location

About this transcript

This transcript has 15 exons, is annotated with 10 domains and features, is associated with 12299 variant alleles and maps to 523 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359655.4	SUPV3L1-001	2484	786aa	ENSP00000352678.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7287	Q8IYB8	NM_003171.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422378.1	SUPV3L1-003	794	263aa	ENSP00000409072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AR60	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000483572.1	SUPV3L1-002	1025	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497254.1	SUPV3L1-007	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478227.1	SUPV3L1-004	597	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486661.1	SUPV3L1-006	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471069.1	SUPV3L1-005	2392	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,484 bps, Translation length: 786 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IYB8

CCDS

This transcript is a member of the Human CCDS set: CCDS7287

Version

ENST00000359655.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000048396 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.