Transcript: ENST00000522072.1 PTDSS1-003

Description

phosphatidylserine synthase 1 [Source:HGNC Symbol;Acc:9587]

Gene Synonyms

KIAA0024, PSS1, PSSA

Location

Chromosome 8: 97,307,420-97,346,210 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features, is associated with 16000 variant alleles and maps to 244 oligo probes.

Gene

This transcript is a product of gene ENSG00000156471.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000517309.1	PTDSS1-001	5177	473aa	ENSP00000430548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6271	P48651 Q9BUQ5	NM_014754.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455950.2	PTDSS1-201	2360	327aa	ENSP00000401248.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BUQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522072.1	PTDSS1-003	1112	301aa	ENSP00000430928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DE85	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337004.4	PTDSS1-002	2366	108aa	ENSP00000337331.4	Nonsense mediated decay		J3KNR6	-	-
ENST00000518776.1	PTDSS1-004	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517982.1	PTDSS1-006	1215	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000517557.1	PTDSS1-005	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,112 bps, Translation length: 301 residues

Version

ENST00000522072.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000379747 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000522072.1 PTDSS1-003

Summary