Transcript: ENST00000286719.7 PPEF2-001

Description

protein phosphatase, EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:9244]

Gene Synonyms

PPP7CB

Location

About this transcript

This transcript has 17 exons, is annotated with 32 domains and features, is associated with 19787 variant alleles and maps to 596 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000286719.7	PPEF2-001	3414	753aa	ENSP00000286719.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34013	E7EPQ9 O14830	NM_006239.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511880.3	PPEF2-002	4160	139aa	ENSP00000426186.2	Nonsense mediated decay		E7EPQ9	-	-
ENST00000510607.1	PPEF2-003	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503352.1	PPEF2-004	219	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513324.1	PPEF2-005	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515552.1	PPEF2-006	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,414 bps, Translation length: 753 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14830

CCDS

This transcript is a member of the Human CCDS set: CCDS34013

Version

ENST00000286719.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000362929 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.