Transcript: ENST00000316916.8 TMEM185A-001

Description

transmembrane protein 185A [Source:HGNC Symbol;Acc:17125]

Gene Synonyms

CXorf13, FAM11A, FRAXF, ee3

Location

Chromosome X: 148,678,216-148,713,568 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 13 domains and features, is associated with 10770 variant alleles and maps to 667 oligo probes.

Gene

This transcript is a product of gene ENSG00000155984.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316916.8	TMEM185A-001	2813	350aa	ENSP00000359449.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14689	Q8NFB2	NM_032508.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536359.1	TMEM185A-201	2555	291aa	ENSP00000443119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55523	E5RGV1 F5H5U0	NM_001174092.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507237.1	TMEM185A-002	903	173aa	ENSP00000427766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMM1 Q8TCB3	NM_001282302.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502858.2	TMEM185A-006	717	223aa	ENSP00000427814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511776.1	TMEM185A-005	283	60aa	ENSP00000428659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGV1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000513505.2	TMEM185A-007	2178	45aa	ENSP00000429207.1	Nonsense mediated decay		E5RJ20	-	-
ENST00000502900.1	TMEM185A-003	684	79aa	ENSP00000428852.1	Nonsense mediated decay		E5RFI9	-	-
ENST00000502618.1	TMEM185A-004	436	60aa	ENSP00000429625.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519015.2	TMEM185A-009	3033	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000517359.1	TMEM185A-008	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,813 bps, Translation length: 350 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NFB2

CCDS

This transcript is a member of the Human CCDS set: CCDS14689

Version

ENST00000316916.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000058710 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000316916.8 TMEM185A-001

Summary