Transcript: ENST00000388957.3 OTOA-004

Description

otoancorin [Source:HGNC Symbol;Acc:16378]

Gene Synonyms

CT108, DFNB22

Location

Chromosome 16: 21,716,284-21,772,049 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 4 domains and features, is associated with 23238 variant alleles and maps to 610 oligo probes.

Gene

This transcript is a product of gene ENSG00000155719.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388958.3	OTOA-001	3610	1139aa	ENSP00000373610.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10600	B4DZ38 Q7RTW8	NM_144672.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000286149.4	OTOA-003	3471	1153aa	ENSP00000286149.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZ38 Q7RTW8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388956.4	OTOA-002	3466	1060aa	ENSP00000373608.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53994	B4DZ38 Q7RTW8	NM_001161683.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388957.3	OTOA-004	2703	815aa	ENSP00000373609.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32403	B4DZ38 Q7RTW8	NM_170664.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569064.1	OTOA-007	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563871.1	OTOA-005	4635	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563506.1	OTOA-006	2662	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,703 bps, Translation length: 815 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7RTW8

CCDS

This transcript is a member of the Human CCDS set: CCDS32403

Version

ENST00000388957.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000430022 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000388957.3 OTOA-004

Summary