Transcript: ENST00000306534.3 ROBO4-001

Description

roundabout, axon guidance receptor, homolog 4 (Drosophila) [Source:HGNC Symbol;Acc:17985]

Gene Synonyms

ECSM4, FLJ20798, MRB

Location

Chromosome 11: 124,753,587-124,768,177 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 33 domains and features, is associated with 7415 variant alleles and maps to 711 oligo probes.

Gene

This transcript is a product of gene ENSG00000154133.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306534.3	ROBO4-001	4710	1007aa	ENSP00000304945.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8455	B4DYV8 Q8WZ75	NM_019055.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533054.1	ROBO4-003	3071	862aa	ENSP00000437129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DYV8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526899.1	ROBO4-013	819	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527279.1	ROBO4-012	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529941.1	ROBO4-008	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534407.1	ROBO4-007	3904	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532216.1	ROBO4-006	1467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525182.1	ROBO4-014	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533337.1	ROBO4-009	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532300.1	ROBO4-010	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 4,710 bps, Translation length: 1,007 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WZ75

CCDS

This transcript is a member of the Human CCDS set: CCDS8455

Version

ENST00000306534.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387111 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000306534.3 ROBO4-001

Summary