Transcript: ENST00000570298.1 DNAAF1-002

Description

dynein, axonemal, assembly factor 1 [Source:HGNC Symbol;Acc:30539]

Gene Synonyms

CILD13, FLJ25330, LRRC50, ODA7

Location

Chromosome 16: 84,178,892-84,211,524 forward strand.

About this transcript

This transcript has 11 exons, is associated with 19982 variant alleles and maps to 490 oligo probes.

Gene

This transcript is a product of gene ENSG00000154099.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378553.5	DNAAF1-001	2379	725aa	ENSP00000367815.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10943	H3BP51 Q8NEP3	NM_178452.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334315.5	DNAAF1-201	1438	418aa	ENSP00000334593.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP51 Q8NEP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569735.1	DNAAF1-009	649	190aa	ENSP00000454960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNQ4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564928.1	DNAAF1-008	537	58aa	ENSP00000457899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000563093.1	DNAAF1-004	1766	418aa	ENSP00000457373.1	Nonsense mediated decay		H3BP51 Q8NEP3	-	-
ENST00000567918.1	DNAAF1-003	1009	247aa	ENSP00000455154.1	Nonsense mediated decay		H3BP51	-	-
ENST00000563818.1	DNAAF1-005	1931	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567666.1	DNAAF1-007	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000570298.1	DNAAF1-002	4708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562024.1	DNAAF1-010	727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 0, Transcript length: 4,708 bps,

Version

ENST00000570298.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000433033 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000570298.1 DNAAF1-002

Summary