Transcript: ENST00000370551.4 HS2ST1-002

Description

heparan sulfate 2-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:5193]

Gene Synonyms

HS2ST, KIAA0448, dJ604K5.2

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 76868 variant alleles and maps to 267 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370550.5	HS2ST1-001	6736	356aa	ENSP00000359581.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS711	K7EP71 Q7LGA3	NM_012262.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356813.4	HS2ST1-201	3558	322aa	ENSP00000349268.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6ND99 K7EP71	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370551.4	HS2ST1-002	1585	229aa	ENSP00000359582.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44171	K7EP71 Q7LGA3	NM_001134492.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591456.1	HS2ST1-003	540	111aa	ENSP00000467253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EP71	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,585 bps, Translation length: 229 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7LGA3

CCDS

This transcript is a member of the Human CCDS set: CCDS44171

Version

ENST00000370551.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457514 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.