Transcript: ENST00000472572.3 C16orf89-003

Description

chromosome 16 open reading frame 89 [Source:HGNC Symbol;Acc:28687]

Gene Synonyms

MGC45438

Location

Chromosome 16: 5,094,123-5,116,041 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 3 domains and features, is associated with 13168 variant alleles and maps to 326 oligo probes.

Gene

This transcript is a product of gene ENSG00000153446.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315997.5	C16orf89-001	1872	402aa	ENSP00000324672.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42116	Q6UX73	NM_152459.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350219.4	C16orf89-201	1871	440aa	ENSP00000283478.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6UX73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474471.3	C16orf89-002	1829	434aa	ENSP00000417158.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422873.1	C16orf89-202	1513	399aa	ENSP00000390402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V0F0	NM_001098514.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472572.3	C16orf89-003	1444	361aa	ENSP00000420566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45404	Q6UX73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591875.1	C16orf89-004	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586629.1	C16orf89-006	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592343.1	C16orf89-005	456	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,444 bps, Translation length: 361 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6UX73

CCDS

This transcript is a member of the Human CCDS set: CCDS45404

Version

ENST00000472572.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000354526 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000472572.3 C16orf89-003

Summary