Transcript: ENST00000283351.4 TRAPPC8-001

Description

trafficking protein particle complex 8 [Source:HGNC Symbol;Acc:29169]

Gene Synonyms

GSG1, HsT2706, KIAA1012, TRS85

Location

Chromosome 18: 29,409,136-29,523,063 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 9 domains and features, is associated with 54250 variant alleles and maps to 880 oligo probes.

Gene

This transcript is a product of gene ENSG00000153339.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283351.4	TRAPPC8-001	6226	1435aa	ENSP00000283351.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11901	J3QKL6 J3QQJ5 Q9Y2L5	NM_014939.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582539.1	TRAPPC8-004	4391	1381aa	ENSP00000463764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKL6 J3QQJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582513.1	TRAPPC8-002	3205	666aa	ENSP00000464591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSA1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577474.1	TRAPPC8-008	862	154aa	ENSP00000463139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKL6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581057.1	TRAPPC8-013	626	96aa	ENSP00000463876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQS5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578658.1	TRAPPC8-005	563	187aa	ENSP00000463973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QR00	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000580104.1	TRAPPC8-003	5014	926aa	ENSP00000462550.1	Nonsense mediated decay		J3KSL8 J3QKL6	-	-
ENST00000584876.1	TRAPPC8-007	715	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582509.1	TRAPPC8-011	713	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577426.1	TRAPPC8-006	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578252.1	TRAPPC8-009	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584604.1	TRAPPC8-012	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578886.1	TRAPPC8-010	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 6,226 bps, Translation length: 1,435 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2L5

CCDS

This transcript is a member of the Human CCDS set: CCDS11901

Version

ENST00000283351.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255355 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000283351.4 TRAPPC8-001

Summary