Transcript: ENST00000341926.3 CAST-004

Description

calpastatin [Source:HGNC Symbol;Acc:1515]

Gene Synonyms

BS-17

Location

Chromosome 5: 96,031,489-96,108,518 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 15 domains and features, is associated with 30660 variant alleles and maps to 998 oligo probes.

Gene

This transcript is a product of gene ENSG00000153113.19 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395813.1	CAST-203	4629	791aa	ENSP00000379158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z574 B7Z5T9 E7EQ12 E7ES10 P20810 Q13940	NM_001284213.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359176.4	CAST-202	4572	772aa	ENSP00000352098.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQ12 E9PSG1 P20810	NM_001284213.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000325674.7	CAST-201	4524	756aa	ENSP00000320319.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQ12 E9PCH5 F8W7E0 P20810	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395812.2	CAST-011	4506	750aa	ENSP00000379157.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54882	E7EQ12 P20810	NM_001284213.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000309190.5	CAST-003	4282	686aa	ENSP00000312523.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4082	E7EQ12 P20810	NM_173060.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437034.2	CAST-041	3377	436aa	ENSP00000412374.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86YM9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511049.1	CAST-013	3273	693aa	ENSP00000421130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338252.3	CAST-005	2972	695aa	ENSP00000343421.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54883	E7EQ12 P20810	NM_001190442.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508830.1	CAST-008	2539	791aa	ENSP00000425721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z574 B7Z5T9 E7EQ12 E7ES10 P20810 Q13940	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341926.3	CAST-004	2487	708aa	ENSP00000339914.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z574 B7Z5T9 E7EQ12 E7ES10 P20810 Q13940	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511782.1	CAST-018	2466	694aa	ENSP00000423638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z574 E7EQ12	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508608.1	CAST-012	2425	754aa	ENSP00000422677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z468 E7EQ12	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504465.1	CAST-020	2336	636aa	ENSP00000425670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQ12 E9PDE4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510756.1	CAST-010	2310	769aa	ENSP00000422176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQ12 E7ESM9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509903.1	CAST-017	2171	673aa	ENSP00000426946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQ12 E9PCH5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510156.1	CAST-016	2079	642aa	ENSP00000422325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ES10 Q13940	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510500.1	CAST-014	1835	465aa	ENSP00000424160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508579.1	CAST-037	1758	423aa	ENSP00000425787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQ12	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515663.1	CAST-015	1473	431aa	ENSP00000422929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511097.2	CAST-007	1399	393aa	ENSP00000422951.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W7E0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421689.2	CAST-009	913	304aa	ENSP00000396558.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PSG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512620.1	CAST-032	904	301aa	ENSP00000426422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQK6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000505143.1	CAST-006	864	288aa	ENSP00000422957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y944	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000514845.1	CAST-023	588	150aa	ENSP00000422612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBR1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506811.1	CAST-025	582	156aa	ENSP00000427092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EN75	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508197.1	CAST-033	567	156aa	ENSP00000422831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQK6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509259.1	CAST-039	565	91aa	ENSP00000423846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC54	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514055.1	CAST-026	559	149aa	ENSP00000421230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGF7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503828.1	CAST-038	499	78aa	ENSP00000422807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAA8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484552.1	CAST-001	1767	450aa	ENSP00000432878.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510098.1	CAST-022	1323	203aa	ENSP00000427195.1	Nonsense mediated decay		P20810	-	-
ENST00000508117.2	CAST-034	571	82aa	ENSP00000422466.1	Nonsense mediated decay		D6RBZ8	-	-
ENST00000348386.3	CAST-002	2272	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504221.1	CAST-030	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509602.1	CAST-042	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507836.1	CAST-027	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507487.1	CAST-031	396	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505402.1	CAST-029	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509529.1	CAST-021	3066	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513666.1	CAST-019	1539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504532.1	CAST-035	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515063.1	CAST-036	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515160.1	CAST-028	617	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510245.1	CAST-024	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512191.1	CAST-040	406	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 30, Coding exons: 28, Transcript length: 2,487 bps, Translation length: 708 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20810

Version

ENST00000341926.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000250199 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000341926.3 CAST-004

Summary