Transcript: ENST00000515001.1 CENPH-002

Description

centromere protein H [Source:HGNC Symbol;Acc:17268]

Gene Synonyms

ICEN35

Location

About this transcript

This transcript has 8 exons, is annotated with 5 domains and features, is associated with 10069 variant alleles and maps to 299 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283006.2	CENPH-001	1389	247aa	ENSP00000283006.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3998	Q9H3R5	NM_022909.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515001.1	CENPH-002	1305	228aa	ENSP00000426014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KVZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502689.1	CENPH-003	692	187aa	ENSP00000423936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000513575.1	CENPH-004	437	98aa	ENSP00000422665.1	Nonsense mediated decay		D6RBJ6	-	-
ENST00000514753.1	CENPH-005	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510742.1	CENPH-006	724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,305 bps, Translation length: 228 residues

Version

ENST00000515001.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000368815 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.