Transcript: ENST00000381070.3 CWC27-001

Description

CWC27 spliceosome-associated protein homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10664]

Gene Synonyms

NY-CO-10, SDCCAG10

Location

About this transcript

This transcript has 14 exons, is annotated with 18 domains and features, is associated with 96323 variant alleles and maps to 545 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000508024.1	CWC27-005	2103	381aa	ENSP00000426802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REK3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381070.3	CWC27-001	2078	472aa	ENSP00000370460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3982	Q6UX04	NM_005869.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545000.1	CWC27-003	881	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485990.1	CWC27-002	671	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506168.1	CWC27-004	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,078 bps, Translation length: 472 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6UX04

CCDS

This transcript is a member of the Human CCDS set: CCDS3982

Version

ENST00000381070.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000157247 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.