Transcript: ENST00000592272.1 EPG5-004

Description

ectopic P-granules autophagy protein 5 homolog (C. elegans) [Source:HGNC Symbol;Acc:29331]

Gene Synonyms

HEEW1, KIAA1632, VICIS, hEPG5

Location

Chromosome 18: 43,437,787-43,496,419 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 3 domains and features, is associated with 24324 variant alleles and maps to 594 oligo probes.

Gene

This transcript is a product of gene ENSG00000152223.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282041.5	EPG5-001	12633	2579aa	ENSP00000282041.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11926	Q9BTI0 Q9BYJ3 Q9HCE0	NM_020964.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590854.1	EPG5-009	6375	505aa	ENSP00000467066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BYJ3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587884.1	EPG5-006	4232	336aa	ENSP00000466990.1	Nonsense mediated decay		K7ENK5	-	-
ENST00000592272.1	EPG5-004	3999	856aa	ENSP00000467464.1	Nonsense mediated decay		K7EPN4	-	-
ENST00000590884.1	EPG5-005	3767	657aa	ENSP00000466403.1	Nonsense mediated decay		K7EM87	-	-
ENST00000585906.1	EPG5-002	4348	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587262.1	EPG5-008	637	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586655.1	EPG5-007	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587973.1	EPG5-010	451	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587974.1	EPG5-003	4457	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 18, Transcript length: 3,999 bps, Translation length: 856 residues

Version

ENST00000592272.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000445084 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000592272.1 EPG5-004

Summary