Transcript: ENST00000507069.1 GABRA2-013

Description

gamma-aminobutyric acid (GABA) A receptor, alpha 2 [Source:HGNC Symbol;Acc:4076]

Location

Chromosome 4: 46,252,306-46,390,730 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 36 domains and features, is associated with 63247 variant alleles and maps to 317 oligo probes.

Gene

This transcript is a product of gene ENSG00000151834.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000507460.1	GABRA2-003	5812	73aa	ENSP00000422805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510861.1	GABRA2-005	3411	451aa	ENSP00000421828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3471	D6RB77 D6RBK9 D6RBL7 P47869 Q4W5L8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514090.1	GABRA2-011	3401	451aa	ENSP00000421300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3471	D6RB77 D6RBK9 D6RBL7 P47869 Q4W5L8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356504.1	GABRA2-002	2770	451aa	ENSP00000348897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3471	D6RB77 D6RBK9 D6RBL7 P47869 Q4W5L8	NM_001114175.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381620.4	GABRA2-001	2525	451aa	ENSP00000371033.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3471	D6RB77 D6RBK9 D6RBL7 P47869 Q4W5L8	NM_000807.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515082.1	GABRA2-004	2366	367aa	ENSP00000423840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB77 D6RBK9 D6RBL7 G5E9Z6 Q4W5L8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540012.1	GABRA2-201	2273	456aa	ENSP00000444409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68692	B7Z1H8	NM_001286827.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507069.1	GABRA2-013	1562	511aa	ENSP00000427603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB77 D6RBK9 D6RBL7 E9PBQ7 Q4W5L8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503806.1	GABRA2-008	596	151aa	ENSP00000424362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB77 D6RBL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506961.1	GABRA2-007	582	137aa	ENSP00000424093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510233.1	GABRA2-010	1155	159aa	ENSP00000422642.1	Nonsense mediated decay		D6RB77 D6RBK9 D6RBL7	-	-
ENST00000513005.1	GABRA2-014	1017	66aa	ENSP00000421639.1	Nonsense mediated decay		D6RCS5	-	-
ENST00000514236.1	GABRA2-012	605	56aa	ENSP00000425240.1	Nonsense mediated decay		H0Y9V8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514193.1	GABRA2-006	574	66aa	ENSP00000425526.1	Nonsense mediated decay		D6RCS5	-	-
ENST00000509716.1	GABRA2-009	363	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,562 bps, Translation length: 511 residues

Version

ENST00000507069.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363658 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000507069.1 GABRA2-013

Summary