Transcript: ENST00000531562.1 KCNJ1-006

Description

potassium inwardly-rectifying channel, subfamily J, member 1 [Source:HGNC Symbol;Acc:6255]

Gene Synonyms

KIR1.1, Kir1.1, ROMK, ROMK1

Location

Chromosome 11: 128,709,959-128,737,191 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 11699 variant alleles and maps to 178 oligo probes.

Gene

This transcript is a product of gene ENSG00000151704.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392665.2	KCNJ1-005	4074	372aa	ENSP00000376433.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8477	P48048	NM_153764.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392666.1	KCNJ1-201	2616	372aa	ENSP00000376434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8477	P48048	NM_153766.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000324036.3	KCNJ1-001	2614	372aa	ENSP00000316233.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8477	P48048	NM_153767.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440599.2	KCNJ1-003	2539	372aa	ENSP00000406320.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8477	P48048	NM_153765.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392664.2	KCNJ1-004	1674	391aa	ENSP00000376432.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8476	P48048	NM_000220.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000324003.3	KCNJ1-002	718	139aa	ENSP00000316136.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P48048	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531562.1	KCNJ1-006	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 525 bps,

Version

ENST00000531562.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000386235 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000531562.1 KCNJ1-006

Summary