Transcript: ENST00000281146.5 C4orf33-001

Description

chromosome 4 open reading frame 33 [Source:HGNC Symbol;Acc:27025]

Gene Synonyms

FLJ33703

Location

Chromosome 4: 130,014,472-130,037,795 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 9421 variant alleles and maps to 376 oligo probes.

Gene

This transcript is a product of gene ENSG00000151470.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000281146.5	C4orf33-001	6170	199aa	ENSP00000281146.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3741	D6RIS3 Q8N1A6	NM_173487.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425929.1	C4orf33-201	1588	199aa	ENSP00000401090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3741	D6RIS3 Q8N1A6	NM_001099783.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502887.1	C4orf33-002	1126	165aa	ENSP00000427406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIS3 D6RIT3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508622.1	C4orf33-005	465	64aa	ENSP00000427431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIS3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508673.1	C4orf33-003	396	102aa	ENSP00000427096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD26 D6RIS3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502360.1	C4orf33-004	519	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 6,170 bps, Translation length: 199 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N1A6

CCDS

This transcript is a member of the Human CCDS set: CCDS3741

Version

ENST00000281146.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257177 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000281146.5 C4orf33-001

Summary