Transcript: ENST00000392678.3 TIRAP-003

Description

toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:HGNC Symbol;Acc:17192]

Gene Synonyms

BACTS1, MAL, Mal, MyD88-2, wyatt

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 4533 variant alleles and maps to 264 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392679.1	TIRAP-001	2195	221aa	ENSP00000376446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8472	P58753	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392680.2	TIRAP-002	2068	221aa	ENSP00000376447.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8472	P58753	NM_001039661.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392678.3	TIRAP-003	1264	235aa	ENSP00000376445.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41731	P58753	NM_148910.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479770.1	TIRAP-008	2245	221aa	ENSP00000436967.1	Nonsense mediated decay	CCDS8472	P58753	-	-
ENST00000488598.1	TIRAP-005	889	49aa	ENSP00000446213.1	Nonsense mediated decay		F5H2K1	-	-
ENST00000467006.2	TIRAP-007	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462401.1	TIRAP-006	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 1,264 bps, Translation length: 235 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P58753

CCDS

This transcript is a member of the Human CCDS set: CCDS41731

Version

ENST00000392678.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000277093 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.