Transcript: ENST00000527150.1 LRRC4C-002

Description

leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:29317]

Gene Synonyms

KIAA1580, NGL-1, NGL1

Location

Chromosome 11: 40,135,791-40,314,680 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 35 domains and features, is associated with 77116 variant alleles and maps to 276 oligo probes.

Gene

This transcript is a product of gene ENSG00000148948.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278198.2	LRRC4C-001	4054	640aa	ENSP00000278198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31464	E9PLP4 Q9HCJ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527150.1	LRRC4C-002	3085	640aa	ENSP00000436976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31464	E9PLP4 Q9HCJ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530763.1	LRRC4C-003	2669	640aa	ENSP00000434761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31464	E9PLP4 Q9HCJ2	NM_020929.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528697.1	LRRC4C-004	2650	640aa	ENSP00000437132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31464	E9PLP4 Q9HCJ2	NM_001258419.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533474.1	LRRC4C-006	583	41aa	ENSP00000431363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLP4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534577.1	LRRC4C-005	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 3,085 bps, Translation length: 640 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HCJ2

CCDS

This transcript is a member of the Human CCDS set: CCDS31464

Version

ENST00000527150.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000389500 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000527150.1 LRRC4C-002

Summary