Transcript: ENST00000377374.4 SLC39A12-002

Description

solute carrier family 39 (zinc transporter), member 12 [Source:HGNC Symbol;Acc:20860]

Gene Synonyms

FLJ30499, LZT-Hs8, ZIP-12, ZIP12, bA570F3.1

Location

Chromosome 10: 18,240,821-18,332,216 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features, is associated with 45913 variant alleles and maps to 511 oligo probes.

Gene

This transcript is a product of gene ENSG00000148482.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377369.2	SLC39A12-201	2808	691aa	ENSP00000366586.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44362	F5GX72 Q504Y0	NM_001145195.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377371.3	SLC39A12-001	2725	690aa	ENSP00000366588.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60493	Q504Y0	NM_001282733.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377374.4	SLC39A12-002	2639	654aa	ENSP00000366591.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7124	Q504Y0	NM_152725.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539911.1	SLC39A12-202	1900	557aa	ENSP00000440445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60494	F5GX72	NM_001282734.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,639 bps, Translation length: 654 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q504Y0

CCDS

This transcript is a member of the Human CCDS set: CCDS7124

Version

ENST00000377374.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000047061 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000377374.4 SLC39A12-002

Summary