Transcript: ENST00000373324.4 LRSAM1-003

Description

leucine rich repeat and sterile alpha motif containing 1 [Source:HGNC Symbol;Acc:25135]

Gene Synonyms

CMT2P, FLJ31641, RIFLE, TAL

Location

Chromosome 9: 130,213,784-130,265,778 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 34 domains and features, is associated with 23806 variant alleles and maps to 833 oligo probes.

Gene

This transcript is a product of gene ENSG00000148356.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323301.4	LRSAM1-004	3376	723aa	ENSP00000322937.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6873	Q6UWE0	NM_138361.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000300417.6	LRSAM1-201	3146	723aa	ENSP00000300417.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6873	Q6UWE0	NM_001005373.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373324.4	LRSAM1-003	3044	696aa	ENSP00000362421.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55347	Q6UWE0	NM_001190723.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373322.1	LRSAM1-006	2849	723aa	ENSP00000362419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6873	Q6UWE0	NM_001005374.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483302.1	LRSAM1-008	1994	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498513.1	LRSAM1-011	868	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472068.1	LRSAM1-012	850	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486587.1	LRSAM1-010	827	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476755.1	LRSAM1-005	477	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485704.1	LRSAM1-007	413	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 23, Transcript length: 3,044 bps, Translation length: 696 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6UWE0

CCDS

This transcript is a member of the Human CCDS set: CCDS55347

Version

ENST00000373324.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054163 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000373324.4 LRSAM1-003

Summary