Transcript: ENST00000373631.3 CRB2-001

Description

crumbs homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:18688]

Gene Synonyms

FLJ16786, FLJ38464

Location

About this transcript

This transcript has 13 exons, is annotated with 137 domains and features, is associated with 13197 variant alleles and maps to 445 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373631.3	CRB2-001	5550	1285aa	ENSP00000362734.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6852	Q5IJ48	NM_173689.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373629.2	CRB2-201	4553	953aa	ENSP00000362732.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5IJ48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359999.3	CRB2-003	3659	1176aa	ENSP00000353092.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5IJ48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460253.1	CRB2-002	3947	953aa	ENSP00000435279.1	Nonsense mediated decay		Q5IJ48	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 5,550 bps, Translation length: 1,285 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5IJ48

CCDS

This transcript is a member of the Human CCDS set: CCDS6852

Version

ENST00000373631.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000053990 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.