Transcript: ENST00000461426.1 SIGMAR1-006

Description

sigma non-opioid intracellular receptor 1 [Source:HGNC Symbol;Acc:8157]

Gene Synonyms

ALS16, OPRS1, SIG-1R, SR-BP, SR-BP1, SRBP, hSigmaR1, sigma1R

Location

About this transcript

This transcript has 2 exons, is associated with 1308 variant alleles and maps to 528 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378892.1	SIGMAR1-002	1743	134aa	ENSP00000368170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T1J1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000277010.4	SIGMAR1-001	1656	223aa	ENSP00000277010.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6562	Q5T1J1 Q99720	NM_005866.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477726.1	SIGMAR1-008	840	192aa	ENSP00000420022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6563	A2A3U5 Q99720	NM_147157.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353468.4	SIGMAR1-003	1582	106aa	ENSP00000434453.1	Nonsense mediated decay		Q99720	-	-
ENST00000461426.1	SIGMAR1-006	939	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497006.1	SIGMAR1-007	610	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478146.1	SIGMAR1-005	485	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 939 bps,

Version

ENST00000461426.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052209 (version 1)