Transcript: ENST00000276654.5 LRP12-001

Description

low density lipoprotein receptor-related protein 12 [Source:HGNC Symbol;Acc:31708]

Gene Synonyms

FLJ12929, ST7

Location

Chromosome 8: 105,501,478-105,601,234 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 45 domains and features, is associated with 44931 variant alleles and maps to 552 oligo probes.

Gene

This transcript is a product of gene ENSG00000147650.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276654.5	LRP12-001	4112	859aa	ENSP00000276654.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6303	B3KWZ8 E5RIW8 Q9Y561	NM_013437.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424843.2	LRP12-002	4092	840aa	ENSP00000399148.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47907	B3KWZ8 E5RIW8 Q68DE8 Q9Y561	NM_001135703.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523007.1	LRP12-004	889	200aa	ENSP00000429305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIW8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518375.1	LRP12-006	3350	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520770.1	LRP12-007	853	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522046.1	LRP12-005	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519675.1	LRP12-003	5008	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,112 bps, Translation length: 859 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y561

CCDS

This transcript is a member of the Human CCDS set: CCDS6303

Version

ENST00000276654.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000380821 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000276654.5 LRP12-001

Summary