Transcript: ENST00000495186.1 EBP-004

Description

emopamil binding protein (sterol isomerase) [Source:HGNC Symbol;Acc:3133]

Gene Synonyms

CDPX2, CHO2, CPX, CPXD

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 2670 variant alleles and maps to 559 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000495186.1	EBP-004	1775	230aa	ENSP00000417052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14300	C9J719 C9JJ78 Q15125	NM_006579.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446158.1	EBP-001	714	160aa	ENSP00000390031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J719 C9JJ78	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414061.1	EBP-005	609	145aa	ENSP00000405832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J719	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000276096.6	EBP-002	904	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498425.1	EBP-003	796	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466461.1	EBP-006	694	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,775 bps, Translation length: 230 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15125

CCDS

This transcript is a member of the Human CCDS set: CCDS14300

Version

ENST00000495186.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000083372 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.