Transcript: ENST00000377967.4 KDM6A-001

Description

lysine (K)-specific demethylase 6A [Source:HGNC Symbol;Acc:12637]

Gene Synonyms

KABUK2, UTX, bA386N14.2

Location

Chromosome X: 44,732,757-44,971,847 forward strand.

About this transcript

This transcript has 29 exons, is annotated with 34 domains and features, is associated with 83970 variant alleles and maps to 1104 oligo probes.

Gene

This transcript is a product of gene ENSG00000147050.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377967.4	KDM6A-001	5438	1401aa	ENSP00000367203.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14265	O15550 Q590H7 Q59HG3 Q68D33	NM_021140.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382899.4	KDM6A-201	4337	1408aa	ENSP00000372355.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W8R6 Q590H7 Q68D33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433797.1	KDM6A-003	4324	1044aa	ENSP00000398929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q590H7 Q68D33	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000414389.1	KDM6A-002	4189	999aa	ENSP00000405910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q590H7 Q68D33	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000536777.1	KDM6A-202	4185	1356aa	ENSP00000437405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6S1 Q590H7 Q68D33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543216.1	KDM6A-203	3969	1322aa	ENSP00000443078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5V6 Q590H7 Q68D33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431196.1	KDM6A-008	735	161aa	ENSP00000408230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68D33	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451692.1	KDM6A-005	671	224aa	ENSP00000399980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000479423.1	KDM6A-009	768	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484732.1	KDM6A-007	640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475233.1	KDM6A-004	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485072.1	KDM6A-006	382	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 5,438 bps, Translation length: 1,401 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15550

CCDS

This transcript is a member of the Human CCDS set: CCDS14265

Version

ENST00000377967.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056324 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000377967.4 KDM6A-001

Summary