Transcript: ENST00000275857.6 NLGN4X-001

Description

neuroligin 4, X-linked [Source:HGNC Symbol;Acc:14287]

Gene Synonyms

ASPGX2, AUTSX2, HLNX, HNL4X, KIAA1260, NLGN, NLGN4

Location

Chromosome X: 5,808,319-6,145,888 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 109207 variant alleles and maps to 577 oligo probes.

Gene

This transcript is a product of gene ENSG00000146938.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381095.3	NLGN4X-004	5870	816aa	ENSP00000370485.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14126	B3KMT6 Q8N0W4	NM_181332.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381093.2	NLGN4X-201	5748	836aa	ENSP00000370483.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KMT6 Q8N0W4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000275857.6	NLGN4X-001	5454	816aa	ENSP00000275857.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14126	B3KMT6 Q8N0W4	NM_020742.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381092.1	NLGN4X-003	3750	816aa	ENSP00000370482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14126	B3KMT6 Q8N0W4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538097.1	NLGN4X-202	3251	816aa	ENSP00000439203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14126	B3KMT6 Q8N0W4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469740.1	NLGN4X-005	894	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483337.1	NLGN4X-006	749	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477079.1	NLGN4X-002	600	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 5,454 bps, Translation length: 816 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N0W4

CCDS

This transcript is a member of the Human CCDS set: CCDS14126

Version

ENST00000275857.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055670 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000275857.6 NLGN4X-001

Summary