Transcript: ENST00000275605.3 PSPH-001

Description

phosphoserine phosphatase [Source:HGNC Symbol;Acc:9577]

Gene Synonyms

PSP, PSPHD

Location

Chromosome 7: 56,078,760-56,119,297 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 19114 variant alleles and maps to 638 oligo probes.

Gene

This transcript is a product of gene ENSG00000146733.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395471.3	PSPH-002	2178	225aa	ENSP00000378854.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5522	C9JBI3 C9JEJ7 P78330	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000275605.3	PSPH-001	2131	225aa	ENSP00000275605.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5522	C9JBI3 C9JEJ7 P78330	NM_004577.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421626.1	PSPH-009	826	187aa	ENSP00000398653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBI3 C9JEJ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419984.2	PSPH-007	744	46aa	ENSP00000399660.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEJ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416592.1	PSPH-006	739	2aa	ENSP00000405538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421312.1	PSPH-003	633	46aa	ENSP00000390952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEJ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424596.1	PSPH-010	555	10aa	ENSP00000390452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413218.1	PSPH-004	539	2aa	ENSP00000404674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437355.2	PSPH-012	1409	225aa	ENSP00000401639.2	Nonsense mediated decay	CCDS5522	C9JBI3 C9JEJ7 P78330	-	-
ENST00000427797.1	PSPH-011	809	90aa	ENSP00000403431.1	Nonsense mediated decay		C9JEJ7 F8WD74	-	-
ENST00000459834.1	PSPH-008	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472276.1	PSPH-005	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 2,131 bps, Translation length: 225 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78330

CCDS

This transcript is a member of the Human CCDS set: CCDS5522

Version

ENST00000275605.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251528 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000275605.3 PSPH-001

Summary