Transcript: ENST00000344417.5 C7orf26-001

Description

chromosome 7 open reading frame 26 [Source:HGNC Symbol;Acc:21702]

Gene Synonyms

MGC2718

Location

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 11433 variant alleles and maps to 457 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344417.5	C7orf26-001	2182	449aa	ENSP00000340220.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5353	Q96N11	NM_024067.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359073.5	C7orf26-002	1762	352aa	ENSP00000351974.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96N11	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445375.1	C7orf26-007	675	149aa	ENSP00000390166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000440409.1	C7orf26-005	458	97aa	ENSP00000396194.1	Nonsense mediated decay		H7C0Q5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472693.1	C7orf26-003	1006	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477298.1	C7orf26-004	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,182 bps, Translation length: 449 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96N11

CCDS

This transcript is a member of the Human CCDS set: CCDS5353

Version

ENST00000344417.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000246844 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.