Transcript: ENST00000397100.2 C7orf50-201

Description

chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:22421]

Gene Synonyms

MGC11257, YCR016W

Location

Chromosome 7: 1,036,623-1,177,893 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 87325 variant alleles and maps to 277 oligo probes.

Gene

This transcript is a product of gene ENSG00000146540.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397098.3	C7orf50-002	2131	194aa	ENSP00000380286.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5320	C9JQV0 Q9BRJ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357429.6	C7orf50-001	1294	194aa	ENSP00000350011.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5320	C9JQV0 Q9BRJ6	NM_032350.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397100.2	C7orf50-201	1264	194aa	ENSP00000380288.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5320	C9JQV0 Q9BRJ6	NM_001134396.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412051.1	C7orf50-003	1147	179aa	ENSP00000407380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491163.1	C7orf50-007	621	192aa	ENSP00000420130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQV0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444428.1	C7orf50-005	507	162aa	ENSP00000396542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C0T1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488073.1	C7orf50-006	853	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465681.1	C7orf50-004	2621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,264 bps, Translation length: 194 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BRJ6

CCDS

This transcript is a member of the Human CCDS set: CCDS5320

Version

ENST00000397100.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000322817 (version 3) OTTHUMT00000322816 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397100.2 C7orf50-201

Summary