Transcript: ENST00000274711.6 LRRTM2-001

Description

leucine rich repeat transmembrane neuronal 2 [Source:HGNC Symbol;Acc:19409]

Gene Synonyms

KIAA0416, LRRN2

Location

About this transcript

This transcript has 2 exons, is annotated with 32 domains and features, is associated with 2853 variant alleles and maps to 455 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274711.6	LRRTM2-001	6017	516aa	ENSP00000274711.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47272	O43300	NM_015564.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518785.1	LRRTM2-002	1958	38aa	ENSP00000428398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIQ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521094.2	LRRTM2-003	1182	77aa	ENSP00000430902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHE5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523537.1	LRRTM2-004	498	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 6,017 bps, Translation length: 516 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43300

CCDS

This transcript is a member of the Human CCDS set: CCDS47272

Version

ENST00000274711.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000374043 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.