Transcript: ENST00000513112.1 YIPF5-003

Description

Yip1 domain family, member 5 [Source:HGNC Symbol;Acc:24877]

Gene Synonyms

FINGER5, FinGER5, SB140, SMAP-5, SMAP5, YIP1A

Location

Chromosome 5: 143,538,837-143,550,194 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 5047 variant alleles and maps to 636 oligo probes.

Gene

This transcript is a product of gene ENSG00000145817.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274496.5	YIPF5-001	3147	257aa	ENSP00000274496.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4279	E5RGR9 E5RHH4 Q969M3	NM_030799.8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448443.2	YIPF5-002	2255	257aa	ENSP00000397704.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4279	E5RGR9 E5RHH4 Q969M3	NM_001024947.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513112.1	YIPF5-003	2135	203aa	ENSP00000425422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64277	E5RGR9 E5RHH4 Q969M3	NM_001271732.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519064.1	YIPF5-008	684	177aa	ENSP00000429777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGR9 E5RHH4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522203.1	YIPF5-009	653	101aa	ENSP00000428715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGR9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508754.1	YIPF5-006	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,135 bps, Translation length: 203 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q969M3

CCDS

This transcript is a member of the Human CCDS set: CCDS64277

Version

ENST00000513112.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371887 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000513112.1 YIPF5-003

Summary