Transcript: ENST00000504771.2 TNFAIP8-001

Description

tumor necrosis factor, alpha-induced protein 8 [Source:HGNC Symbol;Acc:17260]

Gene Synonyms

GG2-1, MDC-3.13, NDED, SCC-S2, SCCS2

Location

Chromosome 5: 118,690,009-118,735,383 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 21617 variant alleles and maps to 607 oligo probes.

Gene

This transcript is a product of gene ENSG00000145779.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000504771.2	TNFAIP8-001	8681	198aa	ENSP00000422245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47258	E5RIJ3 O95379	NM_014350.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503646.1	TNFAIP8-002	2502	198aa	ENSP00000421848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47258	E5RIJ3 O95379	NM_001286813.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415806.2	TNFAIP8-003	1990	39aa	ENSP00000408534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513374.1	TNFAIP8-007	1385	210aa	ENSP00000427424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68933	B7Z713 E5RIJ3	NM_001286814.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274456.6	TNFAIP8-006	795	188aa	ENSP00000274456.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47257	E5RIJ3 O95379	NM_001077654.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504642.1	TNFAIP8-004	711	200aa	ENSP00000427160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCM8 E5RIJ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388882.5	TNFAIP8-008	541	68aa	ENSP00000429432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIJ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 8,681 bps, Translation length: 198 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95379

CCDS

This transcript is a member of the Human CCDS set: CCDS47258

Version

ENST00000504771.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000371133 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000504771.2 TNFAIP8-001

Summary