Transcript: ENST00000358731.4 BDP1-016

Description

B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB [Source:HGNC Symbol;Acc:13652]

Gene Synonyms

HSA238520, KIAA1241, KIAA1689, TAF3B1, TFC5, TFIIIB'', TFIIIB150, TFIIIB90, TFNR

Location

Chromosome 5: 70,751,442-70,863,647 forward strand.

About this transcript

This transcript has 39 exons, is annotated with 16 domains and features, is associated with 51357 variant alleles and maps to 1296 oligo probes.

Gene

This transcript is a product of gene ENSG00000145734.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358731.4	BDP1-016	11073	2624aa	ENSP00000351575.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43328	A6H8Y1	NM_018429.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380675.2	BDP1-201	10885	463aa	ENSP00000370050.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6H8Y1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514903.3	BDP1-020	5511	583aa	ENSP00000421910.3	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525844.1	BDP1-019	4997	606aa	ENSP00000432404.1	Nonsense mediated decay		H0YCV8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508917.2	BDP1-018	7194	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508157.3	BDP1-015	3403	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 39, Coding exons: 39, Transcript length: 11,073 bps, Translation length: 2,624 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6H8Y1

CCDS

This transcript is a member of the Human CCDS set: CCDS43328

Version

ENST00000358731.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000374681 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000358731.4 BDP1-016

Summary