Transcript: ENST00000514416.1 HAPLN1-002

Description

hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:2380]

Gene Synonyms

CRTL1

Location

Chromosome 5: 82,947,839-82,978,357 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 12775 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSG00000145681.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274341.4	HAPLN1-001	5607	354aa	ENSP00000274341.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4061	D6RBS1 D6RBX9 D6RC59 D6RG04 P10915	NM_001884.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514416.1	HAPLN1-002	1145	161aa	ENSP00000421726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAK7 D6RBX9 D6RC59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510978.1	HAPLN1-006	989	258aa	ENSP00000422592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBS1 D6RBX9 D6RC59 D6RG04	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508307.1	HAPLN1-005	799	199aa	ENSP00000421341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBX9 D6RC59 D6RG04	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504713.1	HAPLN1-004	788	158aa	ENSP00000422522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBX9 D6RC59	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503117.1	HAPLN1-007	568	182aa	ENSP00000426610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFI7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515590.1	HAPLN1-003	560	153aa	ENSP00000423836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC59	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,145 bps, Translation length: 161 residues

Version

ENST00000514416.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000369777 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000514416.1 HAPLN1-002

Summary