Transcript: ENST00000514665.1 USP53-002

Description

ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:29255]

Gene Synonyms

KIAA1350

Location

Chromosome 4: 120,133,742-120,142,650 forward strand.

About this transcript

This transcript has 2 exons, is associated with 3499 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSG00000145390.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000450251.1	USP53-201	6072	1073aa	ENSP00000409906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43265	Q70EK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274030.6	USP53-001	5936	1073aa	ENSP00000274030.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43265	Q70EK8	NM_019050.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509769.1	USP53-003	4803	327aa	ENSP00000426628.1	Nonsense mediated decay		D6RF54	-	-
ENST00000507906.1	USP53-008	546	64aa	ENSP00000421729.1	Nonsense mediated decay		H0Y8Q1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510737.1	USP53-006	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514305.1	USP53-005	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507597.1	USP53-007	503	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514665.1	USP53-002	4233	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510852.1	USP53-004	2437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 4,233 bps,

Version

ENST00000514665.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364565 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000514665.1 USP53-002

Summary