Transcript: ENST00000393503.2 CNGA3-004

Description

cyclic nucleotide gated channel alpha 3 [Source:HGNC Symbol;Acc:2150]

Gene Synonyms

ACHM2, CCNC1, CCNCa, CCNCalpha, CNCG3, CNG3

Location

About this transcript

This transcript has 2 exons, is associated with 4576 variant alleles and maps to 64 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393504.1	CNGA3-201	3841	694aa	ENSP00000377140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2034	Q16281	NM_001298.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000272602.2	CNGA3-001	3470	694aa	ENSP00000272602.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2034	Q16281	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409937.1	CNGA3-003	2615	698aa	ENSP00000386761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PF93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436404.2	CNGA3-002	2504	676aa	ENSP00000410070.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42719	Q16281	NM_001079878.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393503.2	CNGA3-004	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 569 bps,

Version

ENST00000393503.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329559 (version 1)