Transcript: ENST00000272542.3 SLC20A1-001

Description

solute carrier family 20 (phosphate transporter), member 1 [Source:HGNC Symbol;Acc:10946]

Gene Synonyms

GLVR1, Glvr-1, PIT1, PiT-1

Location

Chromosome 2: 113,403,434-113,421,404 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 14 domains and features, is associated with 8498 variant alleles and maps to 613 oligo probes.

Gene

This transcript is a product of gene ENSG00000144136.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272542.3	SLC20A1-001	3381	679aa	ENSP00000272542.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2099	A7LNJ1 Q8WUM9	NM_005415.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423633.1	SLC20A1-005	668	89aa	ENSP00000392050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000433924.1	SLC20A1-008	638	213aa	ENSP00000390021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000413135.1	SLC20A1-009	584	115aa	ENSP00000413393.1	Nonsense mediated decay		H7C3Q9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000456264.1	SLC20A1-006	574	98aa	ENSP00000403763.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480984.1	SLC20A1-010	738	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490674.1	SLC20A1-003	3202	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498224.1	SLC20A1-004	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492076.1	SLC20A1-007	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,381 bps, Translation length: 679 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WUM9

CCDS

This transcript is a member of the Human CCDS set: CCDS2099

Version

ENST00000272542.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254086 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000272542.3 SLC20A1-001

Summary