Transcript: ENST00000272252.5 GALM-001

Description

galactose mutarotase (aldose 1-epimerase) [Source:HGNC Symbol;Acc:24063]

Gene Synonyms

HEL-S-63p, IBD1

Location

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 34867 variant alleles and maps to 478 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272252.5	GALM-001	2484	342aa	ENSP00000272252.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1797	Q96C23	NM_138801.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410063.1	GALM-003	1023	194aa	ENSP00000386233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZ75	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434934.1	GALM-005	724	218aa	ENSP00000399473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1B5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000444351.1	GALM-002	834	194aa	ENSP00000409083.1	Nonsense mediated decay		H7C320	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000427858.1	GALM-004	597	144aa	ENSP00000410598.1	Nonsense mediated decay		F8WB82	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,484 bps, Translation length: 342 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96C23

CCDS

This transcript is a member of the Human CCDS set: CCDS1797

Version

ENST00000272252.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000219891 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.