Transcript: ENST00000366862.5 FBXO28-001

Description

F-box protein 28 [Source:HGNC Symbol;Acc:29046]

Gene Synonyms

CENP-30, FLJ10766, Fbx28, KIAA0483

Location

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 22232 variant alleles and maps to 509 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366862.5	FBXO28-001	5451	368aa	ENSP00000355827.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1539	B4E0H5 Q9NVF7	NM_015176.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424254.2	FBXO28-003	1334	179aa	ENSP00000416888.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44320	B4E0H5 Q9NVF7	NM_001136115.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523990.1	FBXO28-005	1415	126aa	ENSP00000430632.1	Nonsense mediated decay		B4E0H5	-	-
ENST00000519894.1	FBXO28-004	729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483773.1	FBXO28-002	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 5,451 bps, Translation length: 368 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NVF7

CCDS

This transcript is a member of the Human CCDS set: CCDS1539

Version

ENST00000366862.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000091283 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.