Transcript: ENST00000366890.1 TAF1A-002

Description

TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa [Source:HGNC Symbol;Acc:11532]

Gene Synonyms

MGC:17061, RAFI48, SL1, TAFI48

Location

Chromosome 1: 222,731,244-222,763,127 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 4 domains and features, is associated with 12523 variant alleles and maps to 591 oligo probes.

Gene

This transcript is a product of gene ENSG00000143498.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000350027.4	TAF1A-201	1911	450aa	ENSP00000339976.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1531	Q15573	NM_001201536.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352967.4	TAF1A-001	1894	450aa	ENSP00000327072.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1531	Q15573	NM_005681.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000391882.1	TAF1A-202	1708	336aa	ENSP00000375754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1532	Q15573	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366890.1	TAF1A-002	1648	336aa	ENSP00000355856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1532	Q15573	NM_139352.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543857.1	TAF1A-203	1235	311aa	ENSP00000437725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DS21	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000391883.2	TAF1A-005	894	286aa	ENSP00000375755.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JRA7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465263.1	TAF1A-003	1047	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487009.1	TAF1A-004	959	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480065.1	TAF1A-006	784	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 8, Transcript length: 1,648 bps, Translation length: 336 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15573

CCDS

This transcript is a member of the Human CCDS set: CCDS1532

Version

ENST00000366890.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000091494 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000366890.1 TAF1A-002

Summary