Transcript: ENST00000341697.3 SEMA6C-004

Description

sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C [Source:HGNC Symbol;Acc:10740]

Gene Synonyms

KIAA1869, SEMAY, m-SemaY, m-SemaY2

Location

About this transcript

This transcript has 19 exons, is annotated with 19 domains and features, is associated with 7670 variant alleles and maps to 714 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341697.3	SEMA6C-004	5262	930aa	ENSP00000344148.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS984	O60650 Q9H3T2 Q9UFI1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368914.3	SEMA6C-001	3892	930aa	ENSP00000357910.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS984	O60650 Q9H3T2 Q9UFI1	-	-
ENST00000368913.3	SEMA6C-002	3817	962aa	ENSP00000357909.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53364	Q9H3T2 Q9UFI1	-	-
ENST00000368912.3	SEMA6C-003	3697	922aa	ENSP00000357908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53363	Q9H3T2 Q9UFI1	-	-
ENST00000479820.1	SEMA6C-005	487	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464018.1	SEMA6C-006	485	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489944.1	SEMA6C-007	423	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485745.1	SEMA6C-008	324	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 5,262 bps, Translation length: 930 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H3T2

CCDS

This transcript is a member of the Human CCDS set: CCDS984

Version

ENST00000341697.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000034074 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.