Transcript: ENST00000369064.3 TARS2-001

Description

threonyl-tRNA synthetase 2, mitochondrial (putative) [Source:HGNC Symbol;Acc:30740]

Gene Synonyms

FLJ12528, TARSL1, hsa-mir-6878, thrRS

Location

Chromosome 1: 150,459,893-150,480,078 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 27 domains and features, is associated with 10135 variant alleles and maps to 581 oligo probes.

Gene

This transcript is a product of gene ENSG00000143374.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369064.3	TARS2-001	2729	718aa	ENSP00000358060.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS952	Q9BW92 Q9H045	NM_025150.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606933.1	TARS2-013	2162	636aa	ENSP00000475847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60251	Q9H045 U3KQG0	NM_001271895.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369054.2	TARS2-010	1998	588aa	ENSP00000358050.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60252	Q9H045 Q9H9V2	NM_001271896.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438568.2	TARS2-201	1474	169aa	ENSP00000415002.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQF3 U3KQ50	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369051.3	TARS2-012	2106	135aa	ENSP00000358047.3	Nonsense mediated decay		Q5T5E9	-	-
ENST00000467982.2	TARS2-008	1855	143aa	ENSP00000475551.1	Nonsense mediated decay		U3KQ50	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000463555.1	TARS2-006	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480070.1	TARS2-005	832	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483046.1	TARS2-009	311	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479372.1	TARS2-011	850	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000369053.3	TARS2-002	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462578.1	TARS2-004	609	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460794.1	TARS2-003	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466989.1	TARS2-007	427	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,729 bps, Translation length: 718 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BW92

CCDS

This transcript is a member of the Human CCDS set: CCDS952

Version

ENST00000369064.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000035847 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000369064.3 TARS2-001

Summary