Transcript: ENST00000367590.4 XPR1-001

Description

xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:12827]

Gene Synonyms

SYG1, X3, XR

Location

About this transcript

This transcript has 15 exons, is annotated with 15 domains and features, is associated with 110784 variant alleles and maps to 781 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367590.4	XPR1-001	8474	696aa	ENSP00000356562.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1340	Q9UBH6	NM_004736.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367589.3	XPR1-002	4126	631aa	ENSP00000356561.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44284	Q9UBH6	NM_001135669.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467345.1	XPR1-005	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464817.1	XPR1-004	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498177.1	XPR1-003	485	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 8,474 bps, Translation length: 696 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBH6

CCDS

This transcript is a member of the Human CCDS set: CCDS1340

Version

ENST00000367590.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000084996 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.